STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEOLI_000937Uncharacterized protein. (231 aa)    
Predicted Functional Partners:
NEOLI_005262
DNA-directed RNA polymerase I subunit rpa43.
   
 0.996
NEOLI_000006
DNA-directed RNA polymerase I subunit rpa49.
   
 0.994
NEOLI_002757
DNA-directed RNA polymerases I and III subunit RPAC1.
   
 0.993
NEOLI_004469
DNA-directed RNA polymerases I, II, and III subunit RPABC1.
   
 0.992
NEOLI_000044
DNA-directed RNA polymerases I and III subunit RPAC2.
   
 0.992
NEOLI_001797
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
   
 0.991
NEOLI_002312
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.991
NEOLI_002255
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
   
 0.975
NEOLI_000446
RNA polymerase I-specific transcription initiation factor rrn3.
   
 0.974
NEOLI_005178
Putative DNA-directed RNA polymerase I subunit RPA2.
   
 0.967
Your Current Organism:
Neolecta irregularis
NCBI taxonomy Id: 1198029
Other names: N. irregularis DAH-3, Neolecta irregularis DAH-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.