STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEOLI_000858Signal recognition particle receptor subunit beta. (198 aa)    
Predicted Functional Partners:
NEOLI_002356
Signal recognition particle receptor subunit alpha.
   
 0.991
NEOLI_000278
Signal recognition particle subunit SRP68.
   
 
 0.931
NEOLI_005074
Uncharacterized protein.
   
 
 0.929
NEOLI_000966
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.
   
 
 0.928
NEOLI_000400
Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family.
    
 
 0.915
NEOLI_002304
Signal recognition particle SEC65 subunit.
   
 
 0.914
NEOLI_003137
Protein kinase rad3.
    
   0.870
NEOLI_004998
60S ribosomal protein L4-B.
    
 
 0.867
NEOLI_005191
60S ribosomal protein L5-B.
    
   0.859
NEOLI_003138
Protein kinase rad3; Belongs to the PI3/PI4-kinase family.
    
   0.857
Your Current Organism:
Neolecta irregularis
NCBI taxonomy Id: 1198029
Other names: N. irregularis DAH-3, Neolecta irregularis DAH-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.