STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEOLI_004344Protein csx2. (978 aa)    
Predicted Functional Partners:
NEOLI_001866
ADP-ribosylation factor GTPase-activating protein glo3.
    
0.815
NEOLI_004559
Arf-GAP domain-containing protein.
   
0.788
NEOLI_005293
Ras-related protein Rab-11B.
    
 0.743
NEOLI_001297
ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.
    
 0.739
NEOLI_003191
Exocyst complex protein EXO70; Involved in the secretory pathway as part of the exocyst complex which tethers secretory vesicles to the sites of exocytosis. Also plays a role in the assembly of the exocyst. Belongs to the EXO70 family.
     
 0.671
NEOLI_005118
Nuclear control of ATPase protein 2.
    
 0.662
NEOLI_003729
GTP-binding protein ypt2.
    
 0.662
NEOLI_001157
UBA domain-containing protein 3.
    
 0.628
NEOLI_002462
Rab guanine nucleotide exchange factor sec2.
     
 0.612
NEOLI_001926
Exocyst complex component sec10.
   
 
 0.594
Your Current Organism:
Neolecta irregularis
NCBI taxonomy Id: 1198029
Other names: N. irregularis DAH-3, Neolecta irregularis DAH-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.