STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEOLI_005409Exosome complex exonuclease rrp6. (460 aa)    
Predicted Functional Partners:
NEOLI_001128
Exosome complex exonuclease dis3; Belongs to the RNR ribonuclease family.
    
 
 0.992
NEOLI_001118
Exosome complex component rrp43.
    
  0.992
NEOLI_001237
WD repeat-containing protein mip1.
   
 0.966
NEOLI_000087
Protein ste16.
   
 0.965
NEOLI_003352
Stress-activated map kinase-interacting protein 1.
    
 0.963
NEOLI_002659
GTP-binding protein gtr2.
    
 0.960
NEOLI_001210
Serine/threonine-protein kinase ATG1.
    
 0.956
NEOLI_004656
TEL2-interacting protein 1.
   
 0.947
NEOLI_001977
ATP-dependent DNA helicase II subunit 2.
   
 0.934
NEOLI_004560
ATP-dependent DNA helicase II subunit 1.
    
 0.933
Your Current Organism:
Neolecta irregularis
NCBI taxonomy Id: 1198029
Other names: N. irregularis DAH-3, Neolecta irregularis DAH-3
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