STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEOLI_005236Ribonuclease P protein subunit p29. (243 aa)    
Predicted Functional Partners:
NEOLI_002467
Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family.
   
 0.997
NEOLI_002509
Ribonucleases P/MRP protein subunit pop1.
   
 0.997
NEOLI_001304
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.975
NEOLI_003262
Protein kri1.
   
  0.967
NEOLI_004987
Putative pyridoxal 5'-phosphate synthase subunit PDX1; Belongs to the PdxS/SNZ family.
     
 0.771
NEOLI_000364
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.768
NEOLI_001628
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
 0.754
NEOLI_002573
Uncharacterized protein.
   
 0.754
NEOLI_002771
Peroxisomal hydratase-dehydrogenase-epimerase.
     
 0.742
NEOLI_001762
Centromere protein S.
   
 0.703
Your Current Organism:
Neolecta irregularis
NCBI taxonomy Id: 1198029
Other names: N. irregularis DAH-3, Neolecta irregularis DAH-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.