STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEOLI_004849Leptomycin B resistance protein pmd1. (1048 aa)    
Predicted Functional Partners:
NEOLI_001853
Cutinase transcription factor 1 alpha.
    
 0.652
NEOLI_001279
Heavy metal tolerance protein.
  
 
0.639
NEOLI_000459
Iron-sulfur clusters transporter atm1, mitochondrial.
    
0.605
NEOLI_002291
Ubiquitin carboxyl-terminal hydrolase.
    
  0.603
NEOLI_000714
USP domain-containing protein.
    
  0.603
NEOLI_004798
AP-2 complex subunit mu; Belongs to the adaptor complexes medium subunit family.
    
  0.598
NEOLI_001836
AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
   
  0.596
NEOLI_004334
ENTH domain-containing protein.
    
 0.589
NEOLI_000513
ATP-dependent permease MDL1, mitochondrial.
  
  
0.583
NEOLI_004025
AP-3 complex subunit delta.
   
  0.581
Your Current Organism:
Neolecta irregularis
NCBI taxonomy Id: 1198029
Other names: N. irregularis DAH-3, Neolecta irregularis DAH-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.