STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEOLI_005178Putative DNA-directed RNA polymerase I subunit RPA2. (124 aa)    
Predicted Functional Partners:
NEOLI_002312
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 0.994
NEOLI_002757
DNA-directed RNA polymerases I and III subunit RPAC1.
  
 0.985
NEOLI_000006
DNA-directed RNA polymerase I subunit rpa49.
   
 0.984
NEOLI_001797
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
  
 0.981
NEOLI_005262
DNA-directed RNA polymerase I subunit rpa43.
   
 0.981
NEOLI_004469
DNA-directed RNA polymerases I, II, and III subunit RPABC1.
  
 0.977
NEOLI_000937
Uncharacterized protein.
   
 0.967
NEOLI_000044
DNA-directed RNA polymerases I and III subunit RPAC2.
   
 0.967
NEOLI_000446
RNA polymerase I-specific transcription initiation factor rrn3.
   
 0.966
NEOLI_001189
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.966
Your Current Organism:
Neolecta irregularis
NCBI taxonomy Id: 1198029
Other names: N. irregularis DAH-3, Neolecta irregularis DAH-3
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