STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEOLI_001667NEDD8-conjugating enzyme UBC12; Belongs to the ubiquitin-conjugating enzyme family. (174 aa)    
Predicted Functional Partners:
NEOLI_005202
NEDD8-activating enzyme E1 catalytic subunit.
    
 0.985
NEOLI_002400
RING-box protein 1.
    
 0.980
NEOLI_004156
Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.
    
 0.977
NEOLI_000487
NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric UBA3-ULA1 E1 enzyme.
    
 0.975
NEOLI_002526
Cullin-1; Belongs to the cullin family.
    
 0.970
NEOLI_000246
Cullin-3; Belongs to the cullin family.
    
 0.968
NEOLI_000480
Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.
    
 0.962
NEOLI_004733
Ubiquitin-activating enzyme E1 1 isoform B; Belongs to the ubiquitin-activating E1 family.
    
 0.949
NEOLI_002854
Ubiquitin-like domain-containing protein.
    
 0.934
NEOLI_001086
Ubiquitin-activating enzyme E1-like; Belongs to the ubiquitin-activating E1 family.
    
 0.930
Your Current Organism:
Neolecta irregularis
NCBI taxonomy Id: 1198029
Other names: N. irregularis DAH-3, Neolecta irregularis DAH-3
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