STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEOLI_004024Peroxisomal biogenesis factor 3. (305 aa)    
Predicted Functional Partners:
NEOLI_004404
Peroxisome biogenesis protein 19-1.
    
 0.964
NEOLI_004408
Peroxisomal membrane protein PAS20.
   
 0.892
NEOLI_002051
Peroxisomal biogenesis factor 11.
   
 0.816
NEOLI_000737
Peroxisomal membrane protein pex14.
   
 0.813
NEOLI_003791
Peroxisomal membrane protein PEX16.
    
 0.812
NEOLI_005106
Peroxisomal membrane protein PEX14.
   
 0.761
NEOLI_002906
ATP-binding cassette sub-family D member 2.
   
 0.751
NEOLI_000913
ATP-binding cassette sub-family D member 2.
   
 0.751
NEOLI_000046
Mitochondria fission 1 protein.
     
 0.731
NEOLI_002558
Peroxisome biosynthesis protein PAS1.
    
 0.707
Your Current Organism:
Neolecta irregularis
NCBI taxonomy Id: 1198029
Other names: N. irregularis DAH-3, Neolecta irregularis DAH-3
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.