STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEOLI_004960GPI-anchored CFEM domain protein. (151 aa)    
Predicted Functional Partners:
NEOLI_004025
AP-3 complex subunit delta.
   
 0.970
NEOLI_000273
AP-3 complex subunit sigma-1.
    
 0.963
NEOLI_005486
AP-3 complex subunit mu.
   
 0.958
NEOLI_002577
AP-1 complex subunit gamma.
   
 0.954
NEOLI_002768
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
   
 0.705
NEOLI_001836
AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
    
 0.690
NEOLI_003141
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
     
 0.669
NEOLI_000512
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
 0.645
NEOLI_004334
ENTH domain-containing protein.
   
 
 0.636
NEOLI_003665
Endocytosis protein end4.
     
 0.633
Your Current Organism:
Neolecta irregularis
NCBI taxonomy Id: 1198029
Other names: N. irregularis DAH-3, Neolecta irregularis DAH-3
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