STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEOLI_003131Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (340 aa)    
Predicted Functional Partners:
NEOLI_001254
RNA polymerase II subunit A C-terminal domain phosphatase SSU72.
    
 0.994
NEOLI_004881
WD repeat-containing protein 82.
    
 0.993
NEOLI_004084
Protein cft1.
    
 0.990
NEOLI_004691
Endoribonuclease ysh1.
   
 0.990
NEOLI_001323
Polyadenylation factor subunit 2.
   
 0.989
NEOLI_001543
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.989
NEOLI_000426
Protein phosphatase 1 regulatory subunit SDS22.
 
 
 0.988
NEOLI_001600
Putative RING finger protein.
    
 0.982
NEOLI_003560
mRNA 3'-end-processing protein YTH1.
    
 0.967
NEOLI_001345
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
   
 
 0.959
Your Current Organism:
Neolecta irregularis
NCBI taxonomy Id: 1198029
Other names: N. irregularis DAH-3, Neolecta irregularis DAH-3
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