STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEOLI_001055mRNA degradation protein pet127, mitochondrial. (735 aa)    
Predicted Functional Partners:
NEOLI_001453
E3 ubiquitin ligase complex SCF subunit scon-3; Belongs to the SKP1 family.
    
  0.794
NEOLI_001648
Sister chromatid cohesion protein.
    
 0.776
NEOLI_002234
BTD domain-containing protein.
    
 0.701
NEOLI_002118
Uncharacterized protein.
   
 0.656
NEOLI_002780
26S proteasome regulatory subunit rpn11.
    
  0.649
NEOLI_001495
Putative GPI-anchored cupredoxin.
    
 0.648
NEOLI_000653
Centromere protein I.
    
 0.641
NEOLI_003277
ATP-dependent RNA helicase suv3, mitochondrial.
    
 
 0.640
NEOLI_003132
Transcription factor tau subunit sfc4.
    
 0.634
NEOLI_004081
Ubiquitin-40S ribosomal protein S27a.
    
 0.634
Your Current Organism:
Neolecta irregularis
NCBI taxonomy Id: 1198029
Other names: N. irregularis DAH-3, Neolecta irregularis DAH-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.