STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEOLI_003440Protein transport protein sec24. (954 aa)    
Predicted Functional Partners:
NEOLI_002627
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.997
NEOLI_000348
Protein transport protein SEC13; Belongs to the WD repeat SEC13 family.
   
 0.994
NEOLI_004085
Uncharacterized protein.
   
0.988
NEOLI_001434
Protein transport protein SEC31.
   
 0.987
NEOLI_001435
Protein transport protein SEC31.
   
 0.987
NEOLI_004768
Small COPII coat GTPase SAR1; Belongs to the small GTPase superfamily. SAR1 family.
   
 0.984
NEOLI_003244
Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.
   
 0.976
NEOLI_003245
COPII coat assembly protein sec16.
   
 0.975
NEOLI_004157
Uncharacterized protein.
   
 0.971
NEOLI_003006
V-SNARE coiled-coil homology domain-containing protein.
    
 0.959
Your Current Organism:
Neolecta irregularis
NCBI taxonomy Id: 1198029
Other names: N. irregularis DAH-3, Neolecta irregularis DAH-3
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