STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEOLI_002369mRNA-capping enzyme subunit beta. (260 aa)    
Predicted Functional Partners:
NEOLI_003639
mRNA-capping enzyme subunit alpha.
    
 0.990
NEOLI_003429
F-box-like/WD repeat-containing protein TBL1XR1.
   
 0.945
NEOLI_004018
Transcription initiation factor TFIID subunit 5.
   
 0.934
NEOLI_000844
SAGA-associated factor 73.
    
 0.930
NEOLI_003561
Uncharacterized protein.
    
 0.929
NEOLI_001017
SAGA complex subunit spt3.
    
 0.924
NEOLI_004270
Transcription initiation factor TFIID subunit 9.
    
 0.910
NEOLI_003061
Transcription initiation factor TFIID subunit 6.
    
 0.907
NEOLI_002651
Transcriptional adapter 2.
    
 0.890
NEOLI_003163
Ubiquitin carboxyl-terminal hydrolase 2.
    
 0.865
Your Current Organism:
Neolecta irregularis
NCBI taxonomy Id: 1198029
Other names: N. irregularis DAH-3, Neolecta irregularis DAH-3
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.