STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEOLI_001727Meiosis-specific protein HOP1. (667 aa)    
Predicted Functional Partners:
NEOLI_005298
Calcium/calmodulin-dependent protein kinase type I isoform B; Belongs to the protein kinase superfamily.
   
 
 0.902
NEOLI_000007
Meiosis-specific serine/threonine-protein kinase mek1; Belongs to the protein kinase superfamily.
   
 
 0.902
NEOLI_003188
Meiotic recombination protein dmc1; Belongs to the RecA family.
   
 
 0.751
NEOLI_002888
Calcium/calmodulin-dependent protein kinase; Belongs to the protein kinase superfamily.
    
 
 0.669
NEOLI_003508
Pachytene checkpoint protein 2; Belongs to the AAA ATPase family.
   
 
 0.618
NEOLI_000324
DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.
   
 
 0.596
NEOLI_003120
Serine/threonine-protein kinase srk1.
    
 
 0.567
NEOLI_001782
Meiotic recombination protein rec8.
   
 
 0.553
NEOLI_000391
Structural maintenance of chromosomes protein.
    
 
 0.530
NEOLI_004516
DNA repair protein rhp55.
   
 
 0.496
Your Current Organism:
Neolecta irregularis
NCBI taxonomy Id: 1198029
Other names: N. irregularis DAH-3, Neolecta irregularis DAH-3
Server load: low (26%) [HD]