STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEOLI_003478UPF0507 protein. (1045 aa)    
Predicted Functional Partners:
NEOLI_000369
Glycerophosphodiester phosphodiesterase GDE1.
    
 0.836
NEOLI_002254
Cellobiose dehydrogenase.
    
 0.802
NEOLI_001853
Cutinase transcription factor 1 alpha.
    
 0.800
NEOLI_002875
Putative CDP-alcohol phosphatidyltransferase class-I family protein.
    
 0.788
NEOLI_002678
Myosin-2; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.757
NEOLI_001893
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
    
 0.743
NEOLI_004252
Anucleate primary sterigmata protein B isoform A.
    
 0.741
NEOLI_000907
UBA domain-containing protein 7.
    
 0.738
NEOLI_003783
Morphogenesis-related protein MSB1.
  
 
 0.737
NEOLI_002997
Serine/threonine-protein phosphatase.
    
 0.734
Your Current Organism:
Neolecta irregularis
NCBI taxonomy Id: 1198029
Other names: N. irregularis DAH-3, Neolecta irregularis DAH-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.