NEOLI_005287 protein (Neolecta irregularis) - STRING interaction network

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second shell of interactors

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Score

NEOLI_005287

Putative beta-glucosidase btgE. (222 aa)

Predicted Functional Partners:

NEOLI_004220

0.852

NEOLI_003511

0.835

NEOLI_004314

0.789

NEOLI_000118

0.757

NEOLI_002959

0.711

NEOLI_004007

0.707

NEOLI_004610

0.698

NEOLI_002316

0.698

NEOLI_000068

0.698

NEOLI_005420

0.690

Your Current Organism:

Neolecta irregularis

NCBI taxonomy Id: 1198029
Other names: N. irregularis DAH-3, Neolecta irregularis DAH-3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NEOLI_000068	NEOLI_000118	A0A1U7LVA8	A0A1U7LR35	40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.	37S ribosomal protein S8, mitochondrial.	0.999
NEOLI_000068	NEOLI_002959	A0A1U7LVA8	A0A1U7LM16	40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.	40S ribosomal protein S28.	0.999
NEOLI_000068	NEOLI_004007	A0A1U7LVA8	A0A1U7LPS4	40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.	40S ribosomal protein S19-B.	0.999
NEOLI_000068	NEOLI_004220	A0A1U7LVA8	A0A1U7LPA1	40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.	Elongation factor 3.	0.986
NEOLI_000068	NEOLI_004610	A0A1U7LVA8	A0A1U7LL27	40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.	0.999
NEOLI_000068	NEOLI_005287	A0A1U7LVA8	A0A1U7LQC7	40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.	Putative beta-glucosidase btgE.	0.698
NEOLI_000068	NEOLI_005420	A0A1U7LVA8	A0A1U7LKP4	40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	0.999
NEOLI_000118	NEOLI_000068	A0A1U7LR35	A0A1U7LVA8	37S ribosomal protein S8, mitochondrial.	40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.	0.999
NEOLI_000118	NEOLI_002959	A0A1U7LR35	A0A1U7LM16	37S ribosomal protein S8, mitochondrial.	40S ribosomal protein S28.	0.999
NEOLI_000118	NEOLI_004007	A0A1U7LR35	A0A1U7LPS4	37S ribosomal protein S8, mitochondrial.	40S ribosomal protein S19-B.	0.999
NEOLI_000118	NEOLI_004220	A0A1U7LR35	A0A1U7LPA1	37S ribosomal protein S8, mitochondrial.	Elongation factor 3.	0.987
NEOLI_000118	NEOLI_004610	A0A1U7LR35	A0A1U7LL27	37S ribosomal protein S8, mitochondrial.	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.	0.999
NEOLI_000118	NEOLI_005287	A0A1U7LR35	A0A1U7LQC7	37S ribosomal protein S8, mitochondrial.	Putative beta-glucosidase btgE.	0.757
NEOLI_000118	NEOLI_005420	A0A1U7LR35	A0A1U7LKP4	37S ribosomal protein S8, mitochondrial.	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	0.999
NEOLI_002316	NEOLI_004314	A0A1U7LT87	A0A1U7LMI1	Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.	Histone chaperone ASF1.	0.998
NEOLI_002316	NEOLI_005287	A0A1U7LT87	A0A1U7LQC7	Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.	Putative beta-glucosidase btgE.	0.698
NEOLI_002959	NEOLI_000068	A0A1U7LM16	A0A1U7LVA8	40S ribosomal protein S28.	40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.	0.999
NEOLI_002959	NEOLI_000118	A0A1U7LM16	A0A1U7LR35	40S ribosomal protein S28.	37S ribosomal protein S8, mitochondrial.	0.999
NEOLI_002959	NEOLI_004007	A0A1U7LM16	A0A1U7LPS4	40S ribosomal protein S28.	40S ribosomal protein S19-B.	0.999
NEOLI_002959	NEOLI_004220	A0A1U7LM16	A0A1U7LPA1	40S ribosomal protein S28.	Elongation factor 3.	0.985

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Network Stats

number of nodes:

11

number of edges:

40

average node degree:

7.27

avg. local clustering coefficient:

0.813

expected number of edges:

49

PPI enrichment p-value:

0.894

your network does not have significantly more
interactions than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0006526

Arginine biosynthetic process

7 of 10

2.35

5.61

1.68e-12

GO:0009084

Glutamine family amino acid biosynthetic process

8 of 19

2.13

5.26

6.46e-13

GO:1901607

Alpha-amino acid biosynthetic process

9 of 70

1.62

3.29

9.19e-12

GO:0008652

Cellular amino acid biosynthetic process

10 of 86

1.57

3.28

7.76e-13

GO:0006591

Ornithine metabolic process

2 of 2

2.51

1.4

0.0027

Cellular Component (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0005737

Cytoplasm

11 of 1080

0.52

0.44

0.00022

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:250

Arginine biosynthetic process, and Diaminopimelate biosynthetic process

9 of 10

2.46

7.87

1.71e-17

CL:218

Glutamine family amino acid biosynthetic process, and Arginine biosynthesis

10 of 26

2.09

6.48

1.71e-17

CL:253

Arginine biosynthesis, and Amino acid binding

5 of 5

2.51

4.31

4.11e-09

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map00220

Arginine biosynthesis

9 of 20

2.16

6.43

2.64e-16

map01210

2-Oxocarboxylic acid metabolism

6 of 30

1.81

3.15

1.24e-08

map01230

Biosynthesis of amino acids

10 of 131

1.39

2.52

4.48e-12

map01110

Biosynthesis of secondary metabolites

9 of 459

0.8

0.77

1.43e-05

map00300

Lysine biosynthesis

2 of 17

1.58

0.76

0.0289

(more ...)

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0055

Arginine biosynthesis

3 of 4

2.38

2.03

0.00015

KW-0028

Amino-acid biosynthesis

4 of 48

1.43

1.2

0.0012

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF00202

Aminotransferase class-III

2 of 3

2.33

0.73

0.0463

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