STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEOLI_002914Putative ATP-dependent helicase. (1015 aa)    
Predicted Functional Partners:
NEOLI_002516
Postreplication repair E3 ubiquitin-protein ligase rad18.
   
 0.882
NEOLI_001113
Ubiquitin-conjugating enzyme E2 35; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.869
NEOLI_003455
Vezatin domain-containing protein.
  
 0.841
NEOLI_004499
SWI/SNF and RSC complexes subunit arp42; Belongs to the actin family.
   
 0.840
NEOLI_002977
DNA helicase; Belongs to the RuvB family.
    
 0.840
NEOLI_001621
Actin-like protein arp5; Belongs to the actin family.
    
 0.833
NEOLI_003133
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.832
NEOLI_004978
Ubiquitin-like protein pmt3/smt3.
    
 0.819
NEOLI_002079
Ubiquitin-like protein pmt3/smt3.
    
 0.819
NEOLI_001797
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
    
 0.817
Your Current Organism:
Neolecta irregularis
NCBI taxonomy Id: 1198029
Other names: N. irregularis DAH-3, Neolecta irregularis DAH-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.