STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEOLI_002977DNA helicase; Belongs to the RuvB family. (1194 aa)    
Predicted Functional Partners:
NEOLI_003900
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
  
0.999
NEOLI_000252
Chromatin-remodeling complex subunit ies6.
    
 0.995
NEOLI_001621
Actin-like protein arp5; Belongs to the actin family.
    
 0.994
NEOLI_004499
SWI/SNF and RSC complexes subunit arp42; Belongs to the actin family.
   
 0.990
NEOLI_001388
Helicase swr1.
    
 0.988
NEOLI_003811
Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.
    
 0.987
NEOLI_004672
SWR1-complex protein 4.
   
 0.986
NEOLI_000005
Putative DNA helicase INO80.
    
 0.982
NEOLI_003349
Vacuolar protein sorting-associated protein 72.
    
 0.977
NEOLI_000522
Protein AF-9.
    
 0.972
Your Current Organism:
Neolecta irregularis
NCBI taxonomy Id: 1198029
Other names: N. irregularis DAH-3, Neolecta irregularis DAH-3
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