STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEOLI_001132CBF domain-containing protein. (1003 aa)    
Predicted Functional Partners:
NEOLI_000416
Putative NOC2 family protein.
   
 
 0.994
NEOLI_001756
rRNA biogenesis protein rrp5.
   
 
 0.993
NEOLI_003909
25S rRNA (Cytosine-C(5))-methyltransferase nop2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
 
 0.985
NEOLI_000523
ATP-dependent RNA helicase dbp9.
   
 
 0.985
NEOLI_002325
Ribosome production factor 2.
   
 
 0.978
NEOLI_001544
Pescadillo.
   
 
 0.977
NEOLI_002710
RNA helicase.
   
 
 0.973
NEOLI_000281
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.972
NEOLI_001917
Nucleolar protein 12.
   
 
 0.971
NEOLI_001263
Brix domain-containing protein.
   
   0.970
Your Current Organism:
Neolecta irregularis
NCBI taxonomy Id: 1198029
Other names: N. irregularis DAH-3, Neolecta irregularis DAH-3
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