STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEOLI_004533tRNA threonylcarbamoyladenosine dehydratase. (463 aa)    
Predicted Functional Partners:
NEOLI_002452
Cysteine desulfurase, mitochondrial.
    
 0.821
NEOLI_001149
Molybdenum cofactor sulfurase; Sulfurates the molybdenum cofactor. Sulfation of molybdenum is essential for xanthine dehydrogenase (XDH) and aldehyde oxidase (ADO) enzymes in which molybdenum cofactor is liganded by 1 oxygen and 1 sulfur atom in active form.
    
 0.790
NEOLI_000165
Triosephosphate isomerase.
 
    
 0.605
NEOLI_003222
tRNA pseudouridine synthase.
   
  
 0.596
NEOLI_001086
Ubiquitin-activating enzyme E1-like; Belongs to the ubiquitin-activating E1 family.
   
 0.569
NEOLI_005202
NEDD8-activating enzyme E1 catalytic subunit.
   
 0.569
NEOLI_000625
Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation.
   
 
 0.564
NEOLI_001345
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
 
      0.555
NEOLI_002542
D-amino-acid oxidase.
    
  0.547
NEOLI_002066
Putative oxidoreductase.
    
  0.547
Your Current Organism:
Neolecta irregularis
NCBI taxonomy Id: 1198029
Other names: N. irregularis DAH-3, Neolecta irregularis DAH-3
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