STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEOLI_004730DNA repair protein rdl1. (235 aa)    
Predicted Functional Partners:
NEOLI_002687
Werner syndrome ATP-dependent helicase.
   
 0.993
NEOLI_002287
DNA repair protein rhp57.
    
 0.966
NEOLI_002812
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
  
 0.959
NEOLI_003188
Meiotic recombination protein dmc1; Belongs to the RecA family.
   
 0.958
NEOLI_003916
DNA repair and recombination protein radC.
    
 0.938
NEOLI_004176
Crossover junction endonuclease mus81.
   
 0.919
NEOLI_002609
Exodeoxyribonuclease 1.
  
 0.904
NEOLI_000180
N-acetyltransferase eso1.
  
 0.894
NEOLI_001893
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
  
 0.893
NEOLI_004705
ATP-dependent DNA helicase tlh1.
   
 0.880
Your Current Organism:
Neolecta irregularis
NCBI taxonomy Id: 1198029
Other names: N. irregularis DAH-3, Neolecta irregularis DAH-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.