NEOLI_002713 protein (Neolecta irregularis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

NEOLI_002713

Multiprotein-bridging factor 1. (146 aa)

Predicted Functional Partners:

NEOLI_003257

0.956

NEOLI_002550

0.926

NEOLI_005155

0.915

NEOLI_002426

0.914

NEOLI_003121

0.914

NEOLI_002214

0.908

NEOLI_000553

0.908

NEOLI_001259

0.906

NEOLI_004610

0.905

NEOLI_003203

0.903

Your Current Organism:

Neolecta irregularis

NCBI taxonomy Id: 1198029
Other names: N. irregularis DAH-3, Neolecta irregularis DAH-3

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NEOLI_000553	NEOLI_001259	A0A1U7LTI7	A0A1U7LLI4	60S ribosomal protein L35.	40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability.	0.997
NEOLI_000553	NEOLI_002214	A0A1U7LTI7	A0A1U7LN78	60S ribosomal protein L35.	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	0.997
NEOLI_000553	NEOLI_002426	A0A1U7LTI7	A0A1U7LHF9	60S ribosomal protein L35.	40S ribosomal protein S9-A; Belongs to the universal ribosomal protein uS4 family.	0.997
NEOLI_000553	NEOLI_002550	A0A1U7LTI7	A0A1U7LJ34	60S ribosomal protein L35.	40S ribosomal protein S20.	0.997
NEOLI_000553	NEOLI_002713	A0A1U7LTI7	A0A1U7LTI0	60S ribosomal protein L35.	Multiprotein-bridging factor 1.	0.908
NEOLI_000553	NEOLI_003121	A0A1U7LTI7	A0A1U7LN55	60S ribosomal protein L35.	Guanine nucleotide-binding protein subunit beta-like protein.	0.995
NEOLI_000553	NEOLI_003203	A0A1U7LTI7	A0A1U7LSN1	60S ribosomal protein L35.	40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.	0.997
NEOLI_000553	NEOLI_003257	A0A1U7LTI7	A0A1U7LQW5	60S ribosomal protein L35.	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	0.998
NEOLI_000553	NEOLI_004610	A0A1U7LTI7	A0A1U7LL27	60S ribosomal protein L35.	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.	0.998
NEOLI_001259	NEOLI_000553	A0A1U7LLI4	A0A1U7LTI7	40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability.	60S ribosomal protein L35.	0.997
NEOLI_001259	NEOLI_002214	A0A1U7LLI4	A0A1U7LN78	40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability.	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	0.999
NEOLI_001259	NEOLI_002426	A0A1U7LLI4	A0A1U7LHF9	40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability.	40S ribosomal protein S9-A; Belongs to the universal ribosomal protein uS4 family.	0.999
NEOLI_001259	NEOLI_002550	A0A1U7LLI4	A0A1U7LJ34	40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability.	40S ribosomal protein S20.	0.999
NEOLI_001259	NEOLI_002713	A0A1U7LLI4	A0A1U7LTI0	40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability.	Multiprotein-bridging factor 1.	0.906
NEOLI_001259	NEOLI_003121	A0A1U7LLI4	A0A1U7LN55	40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability.	Guanine nucleotide-binding protein subunit beta-like protein.	0.994
NEOLI_001259	NEOLI_003203	A0A1U7LLI4	A0A1U7LSN1	40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability.	40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.	0.999
NEOLI_001259	NEOLI_003257	A0A1U7LLI4	A0A1U7LQW5	40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability.	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	0.999
NEOLI_001259	NEOLI_004610	A0A1U7LLI4	A0A1U7LL27	40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability.	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.	0.999
NEOLI_002214	NEOLI_000553	A0A1U7LN78	A0A1U7LTI7	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	60S ribosomal protein L35.	0.997
NEOLI_002214	NEOLI_001259	A0A1U7LN78	A0A1U7LLI4	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability.	0.999