STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEOLI_000178MFAP1 domain-containing protein. (352 aa)    
Predicted Functional Partners:
NEOLI_002989
Pre-mRNA-splicing factor 38A.
   
 0.997
NEOLI_005072
U4/U6.U5 small nuclear ribonucleoprotein component snu23.
   
 0.997
NEOLI_000677
Pre-mRNA-splicing factor dre4.
   
 0.997
NEOLI_003689
Pre-mRNA-splicing factor prp1.
   
 0.995
NEOLI_002123
U4/U6.U5 tri-snRNP-associated protein snu66.
   
 0.994
NEOLI_000535
Pre-mRNA-processing ATP-dependent RNA helicase PRP5.
   
 0.993
NEOLI_001566
Pre-mRNA-processing factor 31.
   
 0.992
NEOLI_003988
Putative WD repeat-containing protein.
 
 
  0.991
NEOLI_002003
Pre-mRNA-splicing factor brr2.
   
 
 0.987
NEOLI_002904
Pre-mRNA-splicing factor sap114.
   
 
 0.986
Your Current Organism:
Neolecta irregularis
NCBI taxonomy Id: 1198029
Other names: N. irregularis DAH-3, Neolecta irregularis DAH-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.