STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEOLI_003430Homocitrate synthase, mitochondrial; Belongs to the alpha-IPM synthase/homocitrate synthase family. (394 aa)    
Predicted Functional Partners:
NEOLI_001708
Putative dihydroxy-acid dehydratase, mitochondrial.
  
 
 0.912
NEOLI_000931
Putative branched-chain-amino-acid aminotransferase TOXF.
  
 0.900
NEOLI_002788
Acetyl-coenzyme A synthetase.
  
 
 0.877
NEOLI_001032
Putative methylcrotonoyl-CoA carboxylase beta chain, mitochondrial.
  
 0.853
NEOLI_001173
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.843
NEOLI_001172
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.843
NEOLI_004288
Cytochrome b2, mitochondrial.
    
 0.838
NEOLI_000008
Cytochrome b2, mitochondrial.
    
 0.838
NEOLI_000756
Acetolactate synthase small subunit, mitochondrial.
  
 
 0.830
NEOLI_001984
Non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.826
Your Current Organism:
Neolecta irregularis
NCBI taxonomy Id: 1198029
Other names: N. irregularis DAH-3, Neolecta irregularis DAH-3
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