STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEOLI_004252Anucleate primary sterigmata protein B isoform A. (1087 aa)    
Predicted Functional Partners:
NEOLI_005147
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.982
NEOLI_005016
Transport protein particle subunit trs85-2.
    
 0.974
NEOLI_002431
Intracellular protein transport protein USO1.
   
 0.972
NEOLI_000177
Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic.
    
 0.972
NEOLI_001501
Tyrosine-protein phosphatase SIW14.
   
 
 0.967
NEOLI_001687
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
    
 0.961
NEOLI_002285
Putative Rab geranylgeranyltransferase.
    
 0.961
NEOLI_000025
Trafficking protein particle complex subunit 6B.
    
 0.959
NEOLI_003094
Uncharacterized protein.
    
 0.959
NEOLI_005428
Vacuolar protein sorting-associated protein 33A; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.953
Your Current Organism:
Neolecta irregularis
NCBI taxonomy Id: 1198029
Other names: N. irregularis DAH-3, Neolecta irregularis DAH-3
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