NEOLI_002440 protein (Neolecta irregularis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

NEOLI_002440

Ethanolamine-phosphate cytidylyltransferase. (363 aa)

Predicted Functional Partners:

NEOLI_001240

0.902

NEOLI_003990

0.855

NEOLI_001031

0.835

NEOLI_002761

0.824

NEOLI_001594

0.809

NEOLI_000299

0.796

NEOLI_001032

0.794

NEOLI_004351

0.789

NEOLI_002788

0.763

NEOLI_000062

0.755

Your Current Organism:

Neolecta irregularis

NCBI taxonomy Id: 1198029
Other names: N. irregularis DAH-3, Neolecta irregularis DAH-3

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NEOLI_000062	NEOLI_000299	A0A1U7LVB0	A0A1U7LUA0	Acetyl-CoA carboxylase.	Acetolactate synthase.	0.778
NEOLI_000062	NEOLI_001032	A0A1U7LVB0	A0A1U7LGN3	Acetyl-CoA carboxylase.	Putative methylcrotonoyl-CoA carboxylase beta chain, mitochondrial.	0.890
NEOLI_000062	NEOLI_001594	A0A1U7LVB0	A0A1U7LP19	Acetyl-CoA carboxylase.	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial.	0.861
NEOLI_000062	NEOLI_002440	A0A1U7LVB0	A0A1U7LUU3	Acetyl-CoA carboxylase.	Ethanolamine-phosphate cytidylyltransferase.	0.755
NEOLI_000062	NEOLI_002788	A0A1U7LVB0	A0A1U7LGM9	Acetyl-CoA carboxylase.	Acetyl-coenzyme A synthetase.	0.906
NEOLI_000062	NEOLI_004351	A0A1U7LVB0	A0A1U7LKD4	Acetyl-CoA carboxylase.	Putative mitochondrial-processing peptidase subunit beta; Belongs to the peptidase M16 family.	0.754
NEOLI_000299	NEOLI_000062	A0A1U7LUA0	A0A1U7LVB0	Acetolactate synthase.	Acetyl-CoA carboxylase.	0.778
NEOLI_000299	NEOLI_001594	A0A1U7LUA0	A0A1U7LP19	Acetolactate synthase.	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial.	0.807
NEOLI_000299	NEOLI_002440	A0A1U7LUA0	A0A1U7LUU3	Acetolactate synthase.	Ethanolamine-phosphate cytidylyltransferase.	0.796
NEOLI_000299	NEOLI_002788	A0A1U7LUA0	A0A1U7LGM9	Acetolactate synthase.	Acetyl-coenzyme A synthetase.	0.837
NEOLI_001031	NEOLI_001240	A0A1U7LGN4	A0A1U7LKH2	Ethanolamine kinase 2.	Putative CDP-alcohol phosphatidyltransferase class-I family protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.	0.481
NEOLI_001031	NEOLI_002440	A0A1U7LGN4	A0A1U7LUU3	Ethanolamine kinase 2.	Ethanolamine-phosphate cytidylyltransferase.	0.835
NEOLI_001031	NEOLI_002761	A0A1U7LGN4	A0A1U7LJE1	Ethanolamine kinase 2.	Choline/ethanolaminephosphotransferase 2; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.	0.438
NEOLI_001031	NEOLI_003990	A0A1U7LGN4	A0A1U7LKX1	Ethanolamine kinase 2.	Putative choline kinase.	0.825
NEOLI_001032	NEOLI_000062	A0A1U7LGN3	A0A1U7LVB0	Putative methylcrotonoyl-CoA carboxylase beta chain, mitochondrial.	Acetyl-CoA carboxylase.	0.890
NEOLI_001032	NEOLI_001594	A0A1U7LGN3	A0A1U7LP19	Putative methylcrotonoyl-CoA carboxylase beta chain, mitochondrial.	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial.	0.999
NEOLI_001032	NEOLI_002440	A0A1U7LGN3	A0A1U7LUU3	Putative methylcrotonoyl-CoA carboxylase beta chain, mitochondrial.	Ethanolamine-phosphate cytidylyltransferase.	0.794
NEOLI_001032	NEOLI_002788	A0A1U7LGN3	A0A1U7LGM9	Putative methylcrotonoyl-CoA carboxylase beta chain, mitochondrial.	Acetyl-coenzyme A synthetase.	0.878
NEOLI_001032	NEOLI_004351	A0A1U7LGN3	A0A1U7LKD4	Putative methylcrotonoyl-CoA carboxylase beta chain, mitochondrial.	Putative mitochondrial-processing peptidase subunit beta; Belongs to the peptidase M16 family.	0.779
NEOLI_001240	NEOLI_001031	A0A1U7LKH2	A0A1U7LGN4	Putative CDP-alcohol phosphatidyltransferase class-I family protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.	Ethanolamine kinase 2.	0.481