STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEOLI_001109E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. (1922 aa)    
Predicted Functional Partners:
NEOLI_000582
Ubiquitin-conjugating enzyme E2 2; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.940
NEOLI_002653
Ubiquitin-conjugating enzyme E2 2.
    
 
 0.902
NEOLI_004081
Ubiquitin-40S ribosomal protein S27a.
   
 0.902
NEOLI_002854
Ubiquitin-like domain-containing protein.
   
 0.884
NEOLI_000691
Putative ubiquitin fusion degradation protein.
   
 0.876
NEOLI_003536
RNA polymerase I-specific transcription initiation factor rrn7.
    
  0.834
NEOLI_001832
AN1-type zinc finger protein TMC1.
    
  0.764
NEOLI_000082
ERAD-associated E3 ubiquitin-protein ligase doa10.
   
 
 0.749
NEOLI_001528
ERAD-associated E3 ubiquitin-protein ligase HRD1.
    
 
 0.743
NEOLI_000869
E3 ubiquitin-protein ligase listerin.
   
 0.724
Your Current Organism:
Neolecta irregularis
NCBI taxonomy Id: 1198029
Other names: N. irregularis DAH-3, Neolecta irregularis DAH-3
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