STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEOLI_001737tRNA-specific 2-thiouridylase MnmA. (327 aa)    
Predicted Functional Partners:
NEOLI_001364
tRNA modification GTPase GTPBP3, mitochondrial; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
  
 0.878
NEOLI_001474
Mitochondrial translation optimization protein 1.
  
 0.862
NEOLI_001829
ER-derived vesicles protein 41.
  
 0.789
NEOLI_004249
Uncharacterized protein.
  
 0.789
NEOLI_003310
Protein DSF2.
  
 0.789
NEOLI_002542
D-amino-acid oxidase.
   
 
 0.779
NEOLI_002066
Putative oxidoreductase.
   
 
 0.779
NEOLI_002452
Cysteine desulfurase, mitochondrial.
  
 
 0.752
NEOLI_001607
Riboflavin kinase.
  
 
  0.739
NEOLI_002858
Putative argininosuccinate lyase.
    
  0.699
Your Current Organism:
Neolecta irregularis
NCBI taxonomy Id: 1198029
Other names: N. irregularis DAH-3, Neolecta irregularis DAH-3
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