STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEOLI_002044Putative beta-glucan synthesis-associated protein. (605 aa)    
Predicted Functional Partners:
NEOLI_002139
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.684
NEOLI_000314
SWM histone demethylase complex subunit phf1.
    
 0.679
NEOLI_002255
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
  0.677
NEOLI_004469
DNA-directed RNA polymerases I, II, and III subunit RPABC1.
    
  0.677
NEOLI_004401
PWWP domain-containing protein2.
    
 0.669
NEOLI_002696
Putative oxidoreductase.
    
 0.669
NEOLI_002974
DNA-directed RNA polymerase II subunit RPB3.
    
  0.669
NEOLI_003111
DNA-directed RNA polymerase II subunit rpb4.
    
  0.663
NEOLI_001699
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
    
 0.650
NEOLI_004316
Acyl-CoA desaturase 1; Belongs to the cytochrome b5 family.
    
 0.650
Your Current Organism:
Neolecta irregularis
NCBI taxonomy Id: 1198029
Other names: N. irregularis DAH-3, Neolecta irregularis DAH-3
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