STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEOLI_001894Vacuolar protein sorting-associated protein 24. (219 aa)    
Predicted Functional Partners:
NEOLI_004738
DOA4-independent degradation protein 4.
   
0.992
NEOLI_004523
Vacuolar-sorting protein snf7.
   
 0.992
NEOLI_003491
Vacuolar protein-sorting-associated protein 46.
 
 
 0.988
NEOLI_000225
Charged multivesicular body protein 6.
    
 0.982
NEOLI_004041
Charged multivesicular body protein 5.
   
 0.977
NEOLI_000935
Vacuolar protein sorting-associated protein 4; Belongs to the AAA ATPase family.
   
 0.965
NEOLI_000867
Vacuolar protein sorting-associated protein IST1.
    
 0.953
NEOLI_002517
Uncharacterized protein.
   
 0.918
NEOLI_000943
AMSH-like protease sst2.
    
 
 0.900
NEOLI_001840
Putative AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.892
Your Current Organism:
Neolecta irregularis
NCBI taxonomy Id: 1198029
Other names: N. irregularis DAH-3, Neolecta irregularis DAH-3
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