STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEOLI_000421Homocitrate dehydratase, mitochondrial. (153 aa)    
Predicted Functional Partners:
NEOLI_005351
54S ribosomal protein subunit img1, mitochondrial.
   
 
 0.935
NEOLI_000118
37S ribosomal protein S8, mitochondrial.
   
 
 0.929
NEOLI_005233
37S ribosomal protein S26, mitochondrial.
   
 
 0.927
NEOLI_003230
54S ribosomal protein L10, mitochondrial.
   
 
 0.921
NEOLI_001855
37S ribosomal protein mrp21, mitochondrial.
   
   0.918
NEOLI_005270
37S ribosomal protein S19, mitochondrial; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.914
NEOLI_000472
37S ribosomal protein MRP4, mitochondrial; Belongs to the universal ribosomal protein uS2 family.
   
 
 0.913
NEOLI_001780
54S ribosomal protein L22, mitochondrial; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.913
NEOLI_005357
54S ribosomal protein L28, mitochondrial.
   
 
 0.913
NEOLI_004651
54S ribosomal protein L35, mitochondrial.
   
 
 0.912
Your Current Organism:
Neolecta irregularis
NCBI taxonomy Id: 1198029
Other names: N. irregularis DAH-3, Neolecta irregularis DAH-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.