STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADW69733.1KEGG: aba:Acid345_1710 hypothetical protein. (438 aa)    
Predicted Functional Partners:
ADW68377.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: aca:ACP_0571 TonB-dependent receptor.
  
    0.663
ADW68246.1
KEGG: aba:Acid345_0396 hypothetical protein.
  
     0.653
ADW67757.1
KEGG: aba:Acid345_0785 hypothetical protein.
  
     0.648
ADW70212.1
KEGG: aca:ACP_2041 hypothetical protein.
  
     0.648
ADW67296.1
KEGG: aca:ACP_1873 BNR/Asp-box repeat protein.
  
   0.638
ADW67842.1
KEGG: aca:ACP_2952 hypothetical protein.
  
     0.637
ADW70567.1
KEGG: aca:ACP_2289 hypothetical protein.
 
  
 0.623
ADW70048.1
PFAM: Gas vesicle synthesis GvpLGvpF; KEGG: aca:ACP_2324 gas vesicle protein, GvpL/GvpF family.
  
     0.620
ADW68187.1
PFAM: metallophosphoesterase; KEGG: sus:Acid_5668 metallophosphoesterase.
  
   
 0.618
ADW70200.1
KEGG: aca:ACP_3167 type IV secretion/conjugal transfer ATPase, VirB4 family.
 
    0.617
Your Current Organism:
Granulicella tundricola
NCBI taxonomy Id: 1198114
Other names: G. tundricola MP5ACTX9, Granulicella sp. MP5ACTX9, Granulicella tundricola MP5ACTX9, Granulicella tundricola str. MP5ACTX9, Granulicella tundricola strain MP5ACTX9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.