STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A606_06970Transport protein of the alanine or glycine:cation symporter family; COG1115 Na+/alanine symporter. (500 aa)    
Predicted Functional Partners:
A606_06960
COG1254 Acylphosphatases.
       0.636
smc
Chromosome segregation protein; Required for chromosome condensation and partitioning. Belongs to the SMC family.
       0.611
A606_06950
Hypothetical protein.
       0.606
A606_06965
Hypothetical protein.
       0.515
A606_06975
COG1064 Zn-dependent alcohol dehydrogenases.
       0.491
ftsY
Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).
       0.479
A606_07485
Sodium/proline symporter family protein; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.430
A606_06940
Ammonium transporter; COG0004 Ammonia permease.
     
 0.427
Your Current Organism:
Corynebacterium terpenotabidum
NCBI taxonomy Id: 1200352
Other names: C. terpenotabidum Y-11, Corynebacterium terpenotabidum CIP 105927, Corynebacterium terpenotabidum DSM 44721, Corynebacterium terpenotabidum IFO 14764, Corynebacterium terpenotabidum Y-11
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