STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDA37406.1Putative aldouronate transport system substrate-binding protein. (516 aa)    
Predicted Functional Partners:
SDA37385.1
Putative aldouronate transport system permease protein.
 
  0.934
SDA37378.1
Putative aldouronate transport system permease protein.
 
 
  0.917
SDA68183.1
Putative aldouronate transport system permease protein.
  
  0.874
SDA60491.1
Putative aldouronate transport system permease protein.
  
 
  0.855
SDA63980.1
Putative aldouronate transport system permease protein.
  
  0.852
SDA45611.1
Putative aldouronate transport system permease protein.
  
 
  0.849
SDA68191.1
Multiple sugar transport system permease protein.
  
 
  0.849
SDA77300.1
Putative aldouronate transport system permease protein.
  
  0.846
SDA67457.1
Putative aldouronate transport system permease protein.
  
  0.841
SDA45623.1
Putative aldouronate transport system permease protein.
  
  0.840
Your Current Organism:
Lachnospiraceae bacterium G11
NCBI taxonomy Id: 1200747
Other names: L. bacterium G11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.