STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDA38465.1Hypothetical protein. (222 aa)    
Predicted Functional Partners:
SDA38455.1
Uncharacterized protein, contains a NRPS condensation (elongation) domain.
 
     0.959
SDA47685.1
Hypothetical protein.
  
     0.692
SDA37347.1
Uncharacterized surface anchored protein.
  
     0.678
SDA38475.1
Endo-1,4-beta-xylanase.
       0.675
SDA38487.1
Endo-1,4-beta-xylanase, GH35 family.
       0.644
SDA38445.1
N-acetylmuramoyl-L-alanine amidase.
       0.474
SDA45635.1
Putative aldouronate transport system substrate-binding protein.
  
     0.452
SDA37999.1
Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family.
  
     0.442
Your Current Organism:
Lachnospiraceae bacterium G11
NCBI taxonomy Id: 1200747
Other names: L. bacterium G11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.