STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDA79411.1Energy-coupling factor transport system substrate-specific component. (194 aa)    
Predicted Functional Partners:
SDA79401.1
Energy-coupling factor transport system permease protein.
 
     0.968
SDA79394.1
Energy-coupling factor transport system ATP-binding protein.
 
     0.950
SDA79383.1
ATP-binding cassette, subfamily B.
 
     0.943
SDA79375.1
Transcriptional regulator, TetR family.
 
     0.854
SDA79421.1
Transcriptional regulator, TetR family.
 
     0.826
SDA79364.1
ATP-binding cassette, subfamily B.
 
     0.823
SDA79355.1
ATP-binding cassette, subfamily B.
 
     0.821
SDA69952.1
Energy-coupling factor transport system ATP-binding protein.
 
     0.790
SDA69961.1
Energy-coupling factor transport system permease protein.
 
     0.786
SDA69978.1
ATP-binding cassette, subfamily B.
 
     0.779
Your Current Organism:
Lachnospiraceae bacterium G11
NCBI taxonomy Id: 1200747
Other names: L. bacterium G11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.