STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galEUDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (325 aa)    
Predicted Functional Partners:
M900_0434
Nucleotide sugar dehydrogenase.
  
 
 0.826
rfbB
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
0.810
M900_2522
NADH(P)-binding protein, PF13460 family.
 
 
 0.796
EQC47892.1
Hypothetical protein.
  
 
 0.719
M900_1138
HMGL-like protein.
    
 0.702
M900_0080
UTP--glucose-1-phosphate uridylyltransferase domain protein.
    
 0.686
M900_0020
WxcM-like protein.
    
 0.685
M900_1314
Alpha amylase, catalytic domain protein.
  
 
 0.672
M900_0035
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
    
 0.656
M900_0612
NAD dependent epimerase/dehydratase family protein.
   
 0.655
Your Current Organism:
Bacteriovorax sp. Seq25V
NCBI taxonomy Id: 1201288
Other names: B. sp. Seq25_V, Bacteriovorax sp. Seq25_V
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.