STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M900_0101Putative lipoprotein. (47 aa)    
Predicted Functional Partners:
M900_0102
Putative membrane protein.
       0.746
M900_0103
Hypothetical protein; Identified by glimmer; putative.
       0.746
nuoN
Proton-translocating NADH-quinone oxidoreductase, chain N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.
       0.486
M900_0104
Hypothetical protein; Identified by glimmer; putative.
       0.479
M900_0105
Putative membrane protein; Overlaps another CDS with the same product name.
       0.479
M900_0106
Putative membrane protein; Overlaps another CDS with the same product name.
       0.479
M900_0107
Putative membrane protein; Overlaps another CDS with the same product name.
       0.479
M900_0099
Proton-translocating NADH-quinone oxidoreductase, chain M.
       0.465
M900_0108
Tetratricopeptide repeat protein.
       0.419
Your Current Organism:
Bacteriovorax sp. Seq25V
NCBI taxonomy Id: 1201288
Other names: B. sp. Seq25_V, Bacteriovorax sp. Seq25_V
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