STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M900_0183Ssl1-like protein. (330 aa)    
Predicted Functional Partners:
M900_0180
ATPase, AAA family.
 
 
 0.960
M900_0181
PF01882 family protein.
 
  
 0.960
M900_0185
Oxygen tolerance protein.
 
   
 0.895
M900_0184
Von Willebrand factor type A domain protein.
 
   
0.864
M900_0178
Hypothetical protein.
       0.773
M900_0179
S-adenosylmethionine-dependent methyltransferase; Belongs to the methyltransferase superfamily.
       0.773
M900_0182
Hypothetical protein.
       0.773
ribF
Riboflavin biosynthesis protein RibF; Belongs to the ribF family.
       0.773
M900_0187
Shikimate dehydrogenase substrate-binding domain protein.
       0.773
M900_1301
ATPase, AAA family.
 
 
 0.654
Your Current Organism:
Bacteriovorax sp. Seq25V
NCBI taxonomy Id: 1201288
Other names: B. sp. Seq25_V, Bacteriovorax sp. Seq25_V
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.