STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M900_0271Cytochrome b6 family protein. (260 aa)    
Predicted Functional Partners:
M900_0270
Rieske [2Fe-2S] domain protein.
 
 0.999
M900_1770
Hypothetical protein.
   
 
 0.995
M900_1270
Cytochrome c oxidase, cbb3-type, subunit I/cytochrome c oxidase, cbb3-type, subunit II multi-domain protein; Belongs to the heme-copper respiratory oxidase family.
  
 0.991
M900_0272
Putative membrane protein.
     0.990
M900_0286
COX2/NosJ periplasmic domain protein.
 
 0.990
M900_0287
Cytochrome C and quinol oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family.
 
 0.990
M900_0274
Cytochrome c oxidase, subunit III.
 
 0.988
M900_0289
Cytochrome C.
 
 0.985
M900_0099
Proton-translocating NADH-quinone oxidoreductase, chain M.
  
 
 0.980
nuoH
NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.
  
 
 0.976
Your Current Organism:
Bacteriovorax sp. Seq25V
NCBI taxonomy Id: 1201288
Other names: B. sp. Seq25_V, Bacteriovorax sp. Seq25_V
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