STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M900_0515PrkA serine protein kinase. (731 aa)    
Predicted Functional Partners:
M900_1041
SpoVR family protein.
 
  
 0.961
M900_1040
PF04285 domain protein; Belongs to the UPF0229 family.
 
  
 0.959
M900_2026
UvrD/REP helicase N-terminal domain protein.
  
     0.723
M900_2224
Oxidoreductase, aldo/keto reductase family protein.
   
    0.649
M900_0573
Anion-transporting ATPase domain protein.
  
     0.603
M900_1388
Ferritin-like protein; Belongs to the Dps family.
   
    0.589
M900_2625
Stage II sporulation protein E.
  
     0.578
M900_1655
PDZ domain-like peptide-binding superfamily.
  
     0.571
M900_2494
PhoH family protein.
  
  
 0.552
EQC47716.1
Catalase domain protein.
   
  
 0.545
Your Current Organism:
Bacteriovorax sp. Seq25V
NCBI taxonomy Id: 1201288
Other names: B. sp. Seq25_V, Bacteriovorax sp. Seq25_V
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.