STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M900_0969Ribosomal protein L11 methyltransferase-like protein. (197 aa)    
Predicted Functional Partners:
M900_1394
Unspecific monooxygenase; Belongs to the cytochrome P450 family.
    
 0.764
M900_0967
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
       0.762
EQC44288.1
Glycine dehydrogenase (decarboxylating).
     
 0.735
M900_0966
Flavin reductase.
    
  0.683
serB
Phosphoserine phosphatase SerB.
   
  0.636
M900_1717
Putative 8-amino-7-oxononanoate synthase.
 
 
 0.592
metH
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
 0.555
M900_0881
Ribosomal protein L11 methyltransferase-like protein.
  
     0.550
EQC44405.1
Putative 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase.
    
 0.490
EQC44317.1
Aminotransferase, class III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.483
Your Current Organism:
Bacteriovorax sp. Seq25V
NCBI taxonomy Id: 1201288
Other names: B. sp. Seq25_V, Bacteriovorax sp. Seq25_V
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