STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M900_0983Glutathione peroxidase; Belongs to the glutathione peroxidase family. (181 aa)    
Predicted Functional Partners:
EQC44873.1
Putative glutaredoxin domain protein.
  
 0.918
M900_2032
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
  
  
 
0.778
ylqF
Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
       0.762
ggt
Gamma-glutamyltransferase.
     
 0.761
M900_1600
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
  
  
 
0.760
ahpC
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
   
 0.609
M900_0980
LysM domain protein.
       0.531
EQC47716.1
Catalase domain protein.
  
 
 0.497
M900_2120
Redoxin.
  
 0.482
M900_2509
Prokaryotic glutathione synthetase, N-terminal domain/glutathione synthetase, ATP-binding domain multi-domain protein.
     
 0.475
Your Current Organism:
Bacteriovorax sp. Seq25V
NCBI taxonomy Id: 1201288
Other names: B. sp. Seq25_V, Bacteriovorax sp. Seq25_V
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