STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M900_1009Hypothetical protein. (232 aa)    
Predicted Functional Partners:
M900_1010
PF09905 family protein.
 
     0.802
M900_1008
Hypothetical protein.
       0.773
M900_1007
Hypothetical protein.
       0.705
M900_1006
Glucose/sorbosone dehydrogenase domain protein.
       0.686
tsx
Nucleoside-specific channel-forming protein Tsx.
  
     0.498
M900_1005
Adenylate/guanylate cyclase catalytic domain protein.
       0.495
EQC44204.1
Type III restriction enzyme, res subunit.
  
     0.471
M900_2184
ABC transporter, substrate-binding protein, family 3.
  
     0.461
M900_2457
PF10977 family protein.
  
     0.426
M900_0893
Type III restriction enzyme, res subunit.
  
     0.417
Your Current Organism:
Bacteriovorax sp. Seq25V
NCBI taxonomy Id: 1201288
Other names: B. sp. Seq25_V, Bacteriovorax sp. Seq25_V
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.