STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M900_1289Hypothetical protein. (453 aa)    
Predicted Functional Partners:
M900_1291
ABC-2 family transporter protein.
       0.773
M900_1292
Hydrolase, P-loop-like family protein.
       0.773
yciA
acyl-CoA thioester hydrolase YciA.
       0.773
M900_1295
Von Willebrand factor type A domain protein.
    
  0.663
EQC47998.1
Hypothetical protein; Identified by glimmer; putative.
  
 
 0.610
M900_1294
Transporter, MotA/TolQ/ExbB proton channel family protein.
       0.551
M900_0979
CHASE2 domain protein.
    
  0.523
M900_1706
CHASE2 domain protein.
    
  0.523
metH
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.513
M900_1001
Response regulator receiver domain protein.
    
 0.472
Your Current Organism:
Bacteriovorax sp. Seq25V
NCBI taxonomy Id: 1201288
Other names: B. sp. Seq25_V, Bacteriovorax sp. Seq25_V
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.