STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M900_1393stearoyl-CoA 9-desaturase. (319 aa)    
Predicted Functional Partners:
xth
Exodeoxyribonuclease III.
       0.523
M900_1396
PF06080 family protein.
       0.523
M900_1397
Dopa 4,5-dioxygenase family.
       0.523
EQC44378.1
stearoyl-CoA 9-desaturase.
    
 0.519
M900_1398
Hypothetical protein; Identified by glimmer; putative.
       0.498
M900_1399
Hypothetical protein; Identified by glimmer; putative.
       0.498
M900_1394
Unspecific monooxygenase; Belongs to the cytochrome P450 family.
    
 0.482
M900_1682
Fatty acid hydroxylase family protein.
  
 
 0.465
M900_1722
Fatty acid hydroxylase family protein.
  
 
 0.465
EQC47978.1
Fatty acid hydroxylase family protein.
  
 
 0.465
Your Current Organism:
Bacteriovorax sp. Seq25V
NCBI taxonomy Id: 1201288
Other names: B. sp. Seq25_V, Bacteriovorax sp. Seq25_V
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.