STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M900_1485Transporter, small conductance mechanosensitive ion channel MscS family protein. (256 aa)    
Predicted Functional Partners:
M900_1491
Transporter, small conductance mechanosensitive ion channel MscS family protein.
 
    
0.820
M900_1487
Transporter, small conductance mechanosensitive ion channel MscS family protein.
 
    
0.818
M900_1486
Hypothetical protein.
       0.786
M900_1483
EamA-like transporter family protein.
       0.773
M900_1490
Putative magnesium and cobalt transport protein CorA.
       0.765
rimK
Glutathione synthetase, ATP-binding domain protein; Belongs to the RimK family.
  
    0.760
M900_1488
AAA domain protein.
       0.752
M900_1492
PF06127 family protein.
       0.568
M900_1536
Membrane protein, MarC family.
  
    0.499
rplY
Ribosomal protein L25, Ctc-form; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.
       0.410
Your Current Organism:
Bacteriovorax sp. Seq25V
NCBI taxonomy Id: 1201288
Other names: B. sp. Seq25_V, Bacteriovorax sp. Seq25_V
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.