STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M900_1778Cyclopropane-fatty-acyl-phospholipid synthase. (348 aa)    
Predicted Functional Partners:
M900_1779
PF06966 family protein.
     0.977
M900_0278
NAD(P)-binding Rossmann-like domain protein.
  
 0.911
EQC44288.1
Glycine dehydrogenase (decarboxylating).
    
  0.777
M900_1776
Hypothetical protein.
       0.773
M900_0279
PF07103 family protein.
 
  
 0.772
lpdA-2
Dihydrolipoyl dehydrogenase.
    
  0.577
EQC44292.1
Aminotransferase, class III.
   
 0.506
sucB-2
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).
       0.475
sucA
Oxoglutarate dehydrogenase (succinyl-transferring), E1 component.
       0.475
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
   
 
 0.435
Your Current Organism:
Bacteriovorax sp. Seq25V
NCBI taxonomy Id: 1201288
Other names: B. sp. Seq25_V, Bacteriovorax sp. Seq25_V
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