STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M900_2113Hypothetical protein; Identified by glimmer; putative. (88 aa)    
Predicted Functional Partners:
M900_2105
Transport energizing protein, ExbD/TolR family.
       0.515
tolQ
Protein TolQ.
       0.515
M900_2107
Hypothetical protein.
       0.515
M900_2108
Hypothetical protein.
       0.515
M900_2109
Hypothetical protein.
       0.515
M900_2110
Hypothetical protein.
       0.515
sppA
Signal peptide peptidase SppA, 36K type.
       0.515
M900_2104
TolA C-terminal domain protein.
       0.428
M900_2103
Putative Tol-Pal system beta propeller repeat protein TolB.
       0.423
Your Current Organism:
Bacteriovorax sp. Seq25V
NCBI taxonomy Id: 1201288
Other names: B. sp. Seq25_V, Bacteriovorax sp. Seq25_V
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.